Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886531.1_cds_XP_016440668.1_36102
CDS Infomation

[gene=LOC107766403] [db_xref=GeneID:107766403] [protein=tetratricopeptide repeat protein 5-like] [protein_id=XP_016440668.1] [location=complement(join(56249..56368,56895..56966,57841..57910,58019..58133,58237..58327,58792..58929,59289..59342,59515..59609,60468..60557,60675..60744,60847..60957,61050..61159,61524..61716))] [gbkey=CDS]
Sequence

ATGAGCAGTTCTGCCGGAGGAGACGCCGGAGGAGACGCGGGAGGAGAGAATGTGTTTTCA
CAGGTGATTGAATTCGCTAAAGTAATCAATGATTTTCGCAATCACTATTTCCTCCCAAGT
CGTCAGGAAAAAATTGCTGTCCTGAAAGAACAAGCTGATCGTGCTATCCAATTACTCGAC
GCTATTCCTAAAGAGAAGCGGCAATCGCAGGAGGATAACGCGATGTATTTGTACTTGAGA
GGGAAGTTTCTGGATGTGTCTCCTGGTTATAATAAGGAAGCAGAGCAAAGTTTAACAGAA
GCTCTTCAGTTGAATAGTTATATGGTGGATGCATGGATATGCTTAGGAACTTGTGTTTGG
AAACGAGGAGATCTTGATAAAGCTAAAAGTTGCTTTAAATTAGGCCTTGAACAGGATCCG
AAAAATTTGGAGCTATTACGTCAATTATCAGTACTCGAAAGACGACAGTGCACTGGTGAA
ATAGAGGTTGAAGATCCAGAAGAAATCATTGCTGAAAGTATTAAGCATGCCAAGGAAGCA
ATTGCTCTGGATATCCGGGATGGAATATCATGGTATGCCCTAGGAAATGCATGTCTCACT
GCCTATTTTCTGACTGGAGCTTGGGATCATGATATGCTTTATCAGTCATTAAAAGCATAC
AAGAATGCTGCGAAAGACCAAAAGATGATGCGCAGTGCTGAATTGTGTTTCAACTGTTCG
ATGACGTACAAGTTTCTGGAGAACTATTGGATGGCCCTATCTGGATTTGAAAGTGCTGGA
TTATTGGATCCTAGTATTAAAGCTATAGAGCAAGCGTCAAATCTGTGCGATGTTCTTGAT
GATGTAGACTCTTTGCTTAAGAAACTGAATGATGCTAAGCAGCTTTCTTCTCCAACATCA
TCATCTCTGCCTACTGTTGATTCGCTAGCATCATCACTTGCTTCTGTTGAATTGGATCCT
TCTTATGAGAGAGCTACTGTCGATCGCCTAACTGAAGGTCTTAATGAAGGAAAAGCAATC
ACAGGAAAAGTTCTGTTTTCAGTTAAGAATCCGAGCAAAAGACCAATATACTATGTCGTC
TGTGATTCTGACCGCACATGTTTTGTAATTACTGTTTACGGAATACGCGGCACTGCAATC
AAAGAAGAAGATCAGATCACACTTTTGGATCCTTTCTACCATTCCTTTGATTTTGAATGG
AAATTAAAGCGATATCAGTTCAAATCAGTGCGAGTGGATTTTCTGCGACAACTTCGTGTT
AACGGTGCAATTGTCTCGCCTCAACATGTTATTCATCGGTCAATGTATGCCGATCTCATG
AAAGGATAA

Peptide Sequence

PEP ID

XP_016440668.1
PEP Infomation

PREDICTED: tetratricopeptide repeat protein 5-like [Nicotiana tabacum]
Sequence

MSSSAGGDAGGDAGGENVFSQVIEFAKVINDFRNHYFLPSRQEKIAVLKEQADRAIQLLD
AIPKEKRQSQEDNAMYLYLRGKFLDVSPGYNKEAEQSLTEALQLNSYMVDAWICLGTCVW
KRGDLDKAKSCFKLGLEQDPKNLELLRQLSVLERRQCTGEIEVEDPEEIIAESIKHAKEA
IALDIRDGISWYALGNACLTAYFLTGAWDHDMLYQSLKAYKNAAKDQKMMRSAELCFNCS
MTYKFLENYWMALSGFESAGLLDPSIKAIEQASNLCDVLDDVDSLLKKLNDAKQLSSPTS
SSLPTVDSLASSLASVELDPSYERATVDRLTEGLNEGKAITGKVLFSVKNPSKRPIYYVV
CDSDRTCFVITVYGIRGTAIKEEDQITLLDPFYHSFDFEWKLKRYQFKSVRVDFLRQLRV
NGAIVSPQHVIHRSMYADLMKG

Transcript Sequence

Gene sequence data has not been registered.